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SATA support in Linux is still in its initial phase. at least as far as at the time of installation is concerned. the problem is that none of the distros are coming pre-packaged with the 2.6 kernel which supports SATA quite well.
iirc Mandrake 9.2 and SuSE support some SATA controllers inherently and thus at the time of installation you can directly install on SATA drives but i would recommend checking with the manufacturer about the Linux support. some of the manufacturers provide drivers that you can load before installation of the distro (SuSE provides the option, or so i have read) just like in Windows XP installation.
another thing that you can do is a cross installation i.e. you install your distro of choice on an IDE drive and then install on SATA drive from the distro itself using a custom kernel. so there are choices and solutions but you need to dig around a bit ;)
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